A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

A

absolute(Tuple2d) - Method in class javax.vecmath.Tuple2d

Sets each component of the tuple parameter to its absolute value and places the modified values into this tuple.

absolute() - Method in class javax.vecmath.Tuple2d

Sets each component of this tuple to its absolute value.

absolute(Tuple2f) - Method in class javax.vecmath.Tuple2f

Sets each component of the tuple parameter to its absolute value and places the modified values into this tuple.

absolute() - Method in class javax.vecmath.Tuple2f

Sets each component of this tuple to its absolute value.

absolute(Tuple2i) - Method in class javax.vecmath.Tuple2i

Sets each component of the tuple parameter to its absolute value and places the modified values into this tuple.

absolute() - Method in class javax.vecmath.Tuple2i

Sets each component of this tuple to its absolute value.

absolute(Tuple3d) - Method in class javax.vecmath.Tuple3d

Sets each component of the tuple parameter to its absolute value and places the modified values into this tuple.

absolute() - Method in class javax.vecmath.Tuple3d

Sets each component of this tuple to its absolute value.

absolute(Tuple3f) - Method in class javax.vecmath.Tuple3f

Sets each component of the tuple parameter to its absolute value and places the modified values into this tuple.

absolute() - Method in class javax.vecmath.Tuple3f

Sets each component of this tuple to its absolute value.

absolute(Tuple3i) - Method in class javax.vecmath.Tuple3i

Sets each component of the tuple parameter to its absolute value and places the modified values into this tuple.

absolute() - Method in class javax.vecmath.Tuple3i

Sets each component of this tuple to its absolute value.

absolute(Tuple4d) - Method in class javax.vecmath.Tuple4d

Sets each component of the tuple parameter to its absolute value and places the modified values into this tuple.

absolute() - Method in class javax.vecmath.Tuple4d

Sets each component of this tuple to its absolute value.

absolute(Tuple4f) - Method in class javax.vecmath.Tuple4f

Sets each component of the tuple parameter to its absolute value and places the modified values into this tuple.

absolute() - Method in class javax.vecmath.Tuple4f

Sets each component of this tuple to its absolute value.

absolute(Tuple4i) - Method in class javax.vecmath.Tuple4i

Sets each component of the tuple parameter to its absolute value and places the modified values into this tuple.

absolute() - Method in class javax.vecmath.Tuple4i

Sets each component of this tuple to its absolute value.

AbstractConfigurator - Class in com.ryanm.config.imp

Eases implementation of a configurator.

AbstractConfigurator(String) - Constructor for class com.ryanm.config.imp.AbstractConfigurator

Constructs a new AbstractConfigurator

AbstractConfigurator(String, String) - Constructor for class com.ryanm.config.imp.AbstractConfigurator

Constructs a new AbstractConfigurator

AbstractMac - Class in com.speckled.specksim.imp.comm

Handles holding useful fields and rng stuff

AbstractMac() - Constructor for class com.speckled.specksim.imp.comm.AbstractMac

AbstractSink - Class in com.ryanm.logging

Eases implementation of LogSinks by handling listener management, change notification, and preferences handling

AbstractSink(String) - Constructor for class com.ryanm.logging.AbstractSink

Constructs a new Sink with the specified title

AbstractSpeck - Class in com.speckled.specksim.imp.specks

Eases implementation by handling allocation of ids, logging control and repeatable random number generation.

AbstractSpeck(String) - Constructor for class com.speckled.specksim.imp.specks.AbstractSpeck

Standard constructor

AbstractStateRenderer - Class in com.speckled.specksim.gui.imp

This superclass increases rendering efficiency by compiling any subclasses' rendering into a display list, and then using the display list for as long as possible.

AbstractStateRenderer() - Constructor for class com.speckled.specksim.gui.imp.AbstractStateRenderer

ACTION_TYPE - Static variable in interface com.ryanm.config.Configurator

Type flag for actions.

actionPerformed(ActionEvent) - Method in class com.ryanm.config.swing.imp.ActionWidget

actionPerformed(ActionEvent) - Method in class com.ryanm.config.swing.imp.BooleanWidget

actionPerformed(ActionEvent) - Method in class com.ryanm.config.swing.imp.FileWidget

actionPerformed(ActionEvent) - Method in class com.ryanm.config.swing.imp.StringWidget

ActionWidget - Class in com.ryanm.config.swing.imp

A widget for triggering an Action variable

ActionWidget(Configurator, String) - Constructor for class com.ryanm.config.swing.imp.ActionWidget

Constructs a widget for initiating an action

ActionWidget() - Constructor for class com.ryanm.config.swing.imp.ActionWidget

add(Component) - Method in class com.ryanm.config.swing.Widget

add(Component, int) - Method in class com.ryanm.config.swing.Widget

add(Component, Object, int) - Method in class com.ryanm.config.swing.Widget

add(Component, Object) - Method in class com.ryanm.config.swing.Widget

add(String, Component) - Method in class com.ryanm.config.swing.Widget

add(SpeckPosition, SpeckPosition) - Static method in class com.speckled.specksim.SpeckPosition

Adds two SpeckOrientations.

add(GMatrix) - Method in class javax.vecmath.GMatrix

Sets the value of this matrix to sum of itself and matrix m1.

add(GMatrix, GMatrix) - Method in class javax.vecmath.GMatrix

Sets the value of this matrix to the matrix sum of matrices m1 and m2.

add(GVector) - Method in class javax.vecmath.GVector

Sets the value of this vector to sum of itself and the specified vector

add(GVector, GVector) - Method in class javax.vecmath.GVector

Sets the value of this vector to the vector sum of vectors vector1 and vector2.

add(double) - Method in class javax.vecmath.Matrix3d

Adds a scalar to each component of this matrix.

add(double, Matrix3d) - Method in class javax.vecmath.Matrix3d

Adds a scalar to each component of the matrix m1 and places the result into this.

add(Matrix3d, Matrix3d) - Method in class javax.vecmath.Matrix3d

Sets the value of this matrix to the matrix sum of matrices m1 and m2.

add(Matrix3d) - Method in class javax.vecmath.Matrix3d

Sets the value of this matrix to the sum of itself and matrix m1.

add(float) - Method in class javax.vecmath.Matrix3f

Adds a scalar to each component of this matrix.

add(float, Matrix3f) - Method in class javax.vecmath.Matrix3f

Adds a scalar to each component of the matrix m1 and places the result into this.

add(Matrix3f, Matrix3f) - Method in class javax.vecmath.Matrix3f

Sets the value of this matrix to the matrix sum of matrices m1 and m2.

add(Matrix3f) - Method in class javax.vecmath.Matrix3f

Sets the value of this matrix to the matrix sum of itself and matrix m1.

add(double) - Method in class javax.vecmath.Matrix4d

Adds a scalar to each component of this matrix.

add(double, Matrix4d) - Method in class javax.vecmath.Matrix4d

Adds a scalar to each component of the matrix m1 and places the result into this.

add(Matrix4d, Matrix4d) - Method in class javax.vecmath.Matrix4d

Sets the value of this matrix to the matrix sum of matrices m1 and m2.

add(Matrix4d) - Method in class javax.vecmath.Matrix4d

Sets the value of this matrix to sum of itself and matrix m1.

add(float) - Method in class javax.vecmath.Matrix4f

Adds a scalar to each component of this matrix.

add(float, Matrix4f) - Method in class javax.vecmath.Matrix4f

Adds a scalar to each component of the matrix m1 and places the result into this.

add(Matrix4f, Matrix4f) - Method in class javax.vecmath.Matrix4f

Sets the value of this matrix to the matrix sum of matrices m1 and m2.

add(Matrix4f) - Method in class javax.vecmath.Matrix4f

Sets the value of this matrix to the sum of itself and matrix m1.

add(Tuple2d, Tuple2d) - Method in class javax.vecmath.Tuple2d

Sets the value of this tuple to the vector sum of tuples t1 and t2.

add(Tuple2d) - Method in class javax.vecmath.Tuple2d

Sets the value of this tuple to the vector sum of itself and tuple t1.

add(Tuple2f, Tuple2f) - Method in class javax.vecmath.Tuple2f

Sets the value of this tuple to the vector sum of tuples t1 and t2.

add(Tuple2f) - Method in class javax.vecmath.Tuple2f

Sets the value of this tuple to the vector sum of itself and tuple t1.

add(Tuple2i, Tuple2i) - Method in class javax.vecmath.Tuple2i

Sets the value of this tuple to the sum of tuples t1 and t2.

add(Tuple2i) - Method in class javax.vecmath.Tuple2i

Sets the value of this tuple to the sum of itself and t1.

add(Tuple3d, Tuple3d) - Method in class javax.vecmath.Tuple3d

Sets the value of this tuple to the sum of tuples t1 and t2.

add(Tuple3d) - Method in class javax.vecmath.Tuple3d

Sets the value of this tuple to the sum of itself and t1.

add(Tuple3f, Tuple3f) - Method in class javax.vecmath.Tuple3f

Sets the value of this tuple to the vector sum of tuples t1 and t2.

add(Tuple3f) - Method in class javax.vecmath.Tuple3f

Sets the value of this tuple to the vector sum of itself and tuple t1.

add(Tuple3i, Tuple3i) - Method in class javax.vecmath.Tuple3i

Sets the value of this tuple to the sum of tuples t1 and t2.

add(Tuple3i) - Method in class javax.vecmath.Tuple3i

Sets the value of this tuple to the sum of itself and t1.

add(Tuple4d, Tuple4d) - Method in class javax.vecmath.Tuple4d

Sets the value of this tuple to the tuple sum of tuples t1 and t2.

add(Tuple4d) - Method in class javax.vecmath.Tuple4d

Sets the value of this tuple to the sum of itself and tuple t1.

add(Tuple4f, Tuple4f) - Method in class javax.vecmath.Tuple4f

Sets the value of this tuple to the sum of tuples t1 and t2.

add(Tuple4f) - Method in class javax.vecmath.Tuple4f

Sets the value of this tuple to the sum of itself and t1.

add(Tuple4i, Tuple4i) - Method in class javax.vecmath.Tuple4i

Sets the value of this tuple to the sum of tuples t1 and t2.

add(Tuple4i) - Method in class javax.vecmath.Tuple4i

Sets the value of this tuple to the sum of itself and t1.

addAssociationListener(AssociationListener) - Static method in class com.ryanm.logging.LoggingManager

Adds an AssociationListener to the LoggingManager.

addBody(Body, BodyPath) - Method in class com.speckled.specksim.imp.motion.SpeckledBodyModel

Adds a body to this movement model

addCommsModelListener(CommunicationModelListener) - Method in class com.speckled.specksim.SpeckSim

Registers a MessageListener's interest.

addConfiguratorListener(ConfiguratorListener) - Method in interface com.ryanm.config.Configurator

Registers a ConfiguratorListener to this configuration.

addConfiguratorListener(ConfiguratorListener) - Method in class com.ryanm.config.imp.AbstractConfigurator

addExecutionListener(ExecutionListener) - Method in class com.speckled.specksim.SpeckSim

Registers an ExecutionListener's interest.

addFrameListener(FrameListener) - Method in class com.ryanm.glvisualiser.GLVisualiser

Add a FrameListener to this visualiser

addListener(ConfigurationPanel.Listener) - Method in class com.ryanm.config.swing.ConfigurationPanel

Adds a ConfigurationPanel.Listener to this panel

addListener(StateBuffer.Listener) - Method in class com.speckled.specksim.gui.StateBuffer

Adds a StateBuffer.Listener

addMovementModelListener(MovementModelListener) - Method in class com.speckled.specksim.SpeckSim

Registers a MovementModelListener's interest.

addPoint(SpeckPosition, float) - Method in class com.speckled.specksim.imp.motion.BodyPath

Adds a point to this path.

addPopulationListener(PopulationListener) - Method in class com.speckled.specksim.SpeckSim

Register's a PopulationListener's interest.

addPostConstructionTask(Runnable) - Method in class com.ryanm.glvisualiser.GLVisualiser

Specifies a task that is guaranteed to be run after init() has completed.

addPostFrameTask(Runnable) - Method in class com.ryanm.glvisualiser.GLVisualiser

Specifies a task that is guaranteed to be run in the OpenGL thread.

addProgressListener(ProgressListener) - Method in interface com.speckled.specksim.datagen.Generator

Adds a progress listener to this generator.

addRootConfigurator(Configurator) - Method in class com.ryanm.config.swing.SwingGUI

Adds a configurator to this gui.

addSinkListener(SinkListener) - Method in class com.ryanm.logging.AbstractSink

addSinkListener(SinkListener) - Method in interface com.ryanm.logging.LogSink

Adds a listener object to this sink.

addSinkRegistrationListener(SinkRegistrationListener) - Static method in class com.ryanm.logging.LoggingManager

Adds an SinkRegistrationListener to the LoggingManager.

addSourceRegistrationListener(SourceRegistrationListener) - Static method in class com.ryanm.logging.LoggingManager

Adds an SourceRegistrationListener to the LoggingManager.

addSpeck(Speck) - Method in class com.speckled.specksim.SpeckSim

Adds a speck to the simulator

addState(SimulatorState) - Method in class com.speckled.specksim.gui.StateBuffer

Adds a state to the buffer

addStateListener(StateListener) - Method in class com.speckled.specksim.state.StateSink

Registers a listeners interest in this state.

addValueListener(ValueListener) - Method in interface com.ryanm.config.Configurator

Registers a ValueListener to this configuration.

addValueListener(ValueListener) - Method in class com.ryanm.config.imp.AbstractConfigurator

addVariable(String) - Method in class com.ryanm.config.imp.AbstractConfigurator

Adds a variable to this configurator

addVariable(Configurator) - Method in class com.ryanm.config.imp.AbstractConfigurator

Adds a sub-configurator

addWallListener(WallListener) - Method in class com.speckled.specksim.SpeckSim

Register an object's interest in changes to the walls

advanceToTime(float) - Method in class com.speckled.specksim.SpeckSim

Advances the state of the simulation to the specified time

ambientHeat - Variable in class com.speckled.specksim.imp.env.TemperatureEnvironment

The basic ambient heat of the environment

angle - Variable in class javax.vecmath.AxisAngle4d

The angle of rotation in radians.

angle - Variable in class javax.vecmath.AxisAngle4f

The angle of rotation in radians.

angle(GVector) - Method in class javax.vecmath.GVector

Returns the (n-space) angle in radians between this vector and the vector parameter; the return value is constrained to the range [0,PI].

angle(Vector2d) - Method in class javax.vecmath.Vector2d

Returns the angle in radians between this vector and the vector parameter; the return value is constrained to the range [0,PI].

angle(Vector2f) - Method in class javax.vecmath.Vector2f

Returns the angle in radians between this vector and the vector parameter; the return value is constrained to the range [0,PI].

angle(Vector3d) - Method in class javax.vecmath.Vector3d

Returns the angle in radians between this vector and the vector parameter; the return value is constrained to the range [0,PI].

angle(Vector3f) - Method in class javax.vecmath.Vector3f

Returns the angle in radians between this vector and the vector parameter; the return value is constrained to the range [0,PI].

angle(Vector4d) - Method in class javax.vecmath.Vector4d

Returns the (4-space) angle in radians between this vector and the vector parameter; the return value is constrained to the range [0,PI].

angle(Vector4f) - Method in class javax.vecmath.Vector4f

Returns the (4-space) angle in radians between this vector and the vector parameter; the return value is constrained to the range [0,PI].

AnnotatedConfigurator - Class in com.ryanm.config.imp

A configurator that is constructed from an object annotated with the ConfigurableType annotation.

AnnotatedConfigurator(Object) - Constructor for class com.ryanm.config.imp.AnnotatedConfigurator

Builds a new AnnotatedConfigurator.

apply(GL) - Method in class com.ryanm.glvisualiser.GLMaterial

Applies this material to the supplied GL context.

apply(Orientation, GL) - Static method in class com.ryanm.glvisualiser.GLObject

Applies the rotations of the supplied Orientation to the gl context

apply(GL, SpeckPosition) - Static method in class com.speckled.specksim.gui.visualiser.SpeckVisualiser

Applies the supplied orientation to the gl context

applyChange(Configurator, String, Object) - Static method in class com.ryanm.config.swing.Widget

Adds a configuration change to be performed in the Applicator thread.

applyInBeginEnd(GL) - Method in class com.ryanm.glvisualiser.GLMaterial

Applies as much of the material as is possible when in a glBegin/glEnd block.

applyValue(String, Object) - Method in class com.ryanm.config.imp.AbstractConfigurator

This should be overridden to actually apply the new value

applyValue(String, Object) - Method in class com.ryanm.config.imp.AnnotatedConfigurator

applyValue(String, Object) - Method in class com.ryanm.glvisualiser.GLMaterialConfigurator

applyValue(String, Object) - Method in class com.ryanm.logging.StringSink.StringSinkConfigurator

applyValue(String, Object) - Method in class com.speckled.specksim.SpeckPosition.Configurator

ArrowEdge - Class in com.ryanm.glvisualiser.imp

A cylindrical edge with a cone at one end, forming an arrow.

ArrowEdge(GLVisualiser, GLMaterial, int, int, float, float) - Constructor for class com.ryanm.glvisualiser.imp.ArrowEdge

Constructor for an ArrowEdge

arrowLength - Variable in class com.speckled.specksim.gui.imp.GravityRenderer

The length of the arrow

associate(String, LogSink) - Static method in class com.ryanm.logging.LoggingManager

Associates a sink to a source.

AssociateAware - Interface in com.speckled.specksim.imp.state

Used to denote a speck state that has some association with a group of other specks

associationBroken(String, LogSink) - Method in interface com.ryanm.logging.AssociationListener

Called when an association between a source and a sink is broken

AssociationListener - Interface in com.ryanm.logging

Interface for objects that wish to be appraised of changes in the associations between sources and sinks

associationMade(String, LogSink) - Method in interface com.ryanm.logging.AssociationListener

Called when an association is made between a source and a sink

averageData() - Method in class com.speckled.specksim.datagen.StatisticsRecorder

Gets the data from this recorder, averaged over the repetitions

AxisAngle4d - Class in javax.vecmath

A four-element axis angle represented by double-precision floating point x,y,z,angle components.

AxisAngle4d(double, double, double, double) - Constructor for class javax.vecmath.AxisAngle4d

Constructs and initializes an AxisAngle4d from the specified x, y, z, and angle.

AxisAngle4d(double[]) - Constructor for class javax.vecmath.AxisAngle4d

Constructs and initializes an AxisAngle4d from the components contained in the array.

AxisAngle4d(AxisAngle4d) - Constructor for class javax.vecmath.AxisAngle4d

Constructs and initializes an AxisAngle4d from the specified AxisAngle4d.

AxisAngle4d(AxisAngle4f) - Constructor for class javax.vecmath.AxisAngle4d

Constructs and initializes an AxisAngle4d from the specified AxisAngle4f.

AxisAngle4d(Vector3d, double) - Constructor for class javax.vecmath.AxisAngle4d

Constructs and initializes an AxisAngle4d from the specified axis and angle.

AxisAngle4d() - Constructor for class javax.vecmath.AxisAngle4d

Constructs and initializes an AxisAngle4d to (0,0,1,0).

AxisAngle4f - Class in javax.vecmath

A four-element axis angle represented by single-precision floating point x,y,z,angle components.

AxisAngle4f(float, float, float, float) - Constructor for class javax.vecmath.AxisAngle4f

Constructs and initializes a AxisAngle4f from the specified xyzw coordinates.

AxisAngle4f(float[]) - Constructor for class javax.vecmath.AxisAngle4f

Constructs and initializes an AxisAngle4f from the array of length 4.

AxisAngle4f(AxisAngle4f) - Constructor for class javax.vecmath.AxisAngle4f

Constructs and initializes an AxisAngle4f from the specified AxisAngle4f.

AxisAngle4f(AxisAngle4d) - Constructor for class javax.vecmath.AxisAngle4f

Constructs and initializes an AxisAngle4f from the specified AxisAngle4d.

AxisAngle4f(Vector3f, float) - Constructor for class javax.vecmath.AxisAngle4f

Constructs and initializes an AxisAngle4f from the specified axis and angle.

AxisAngle4f() - Constructor for class javax.vecmath.AxisAngle4f

Constructs and initializes an AxisAngle4f to (0,0,1,0).