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Alastair M Kilpatrick
a.m.kilpatrick [at] sms.ed.ac.uk |
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I'm currently a PhD candidate at the University of Edinburgh in the School of Informatics, under the supervision of Dr Stuart Aitken and Dr Bruce Ward. I'm a member of the Centre for Intelligent Systems and their Applications, Edinburgh Bioinformatics and the International Society for Computational Biology. My research interests include machine learning, probabilistic modelling, model optimisation, pattern matching and discovery, bioinformatics & intelligent systems. My working thesis title is "New Approaches for Regulatory Motif Discovery in Alphaproteobacteria".
DipABRSM Principles of Instrumental Teaching (Associated Board of the Royal Schools of Music, 2010)
ECCB'12 Conference Fellowship (SIB Swiss Institute of Bioinformatics) "Listen to what you've got": Three data-based improvements to motif discovery algorithms Me, my work and CISA New approaches for regulatory motif and sRNA discovery in alphaproteobacteria A. M. Kilpatrick, S. Aitken & B. Ward, MCOIN: A novel dual heuristic for determining unknown TFBS motif width A. M. Kilpatrick, S. Aitken & B. Ward, MCOIN: A novel dual heuristic for determining unknown TFBS motif width A. M. Kilpatrick, Three data-based improvements to TFBS motif discovery algorithms A. M. Kilpatrick, Expectation Maximization for DNA motif discovery A. M. Kilpatrick, S. Aitken & B. Ward, An information-theoretic measure of TFBS motif palindromicity (F1000 mirror) A. M. Kilpatrick, Determining the prevalence of gapped TFBS motifs in E. coli A. M. Kilpatrick, Expectation Maximization for DNA motif discovery A. M. Kilpatrick, Expectation Maximization for DNA motif discovery |